bump substrate+polkadot refs and fix builds (#1989)

* bump refs and fix build

* more fixes

* Fix rialto-parachain node

* Update dependencies for tools/runtime-codegen

* Regenerate rialto-parachain indirect runtime

* Fix register_parachain

* Fix clippy

* Undo clippy allow

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Co-authored-by: Serban Iorga <[email protected]>